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Genus
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Mean relative abundance in farm A (%) (SD)
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Mean relative abundance in farm B (%) (SD)
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Estimated difference farm A - farm B ± SE
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|---|
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Actinobacteria
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Adlercreutzia
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0.89 (0.47)
|
1.14 (0.23)
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−0.19 ± 0.06
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Bacteroidetes
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Bacteroides
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1.88 (0.67)
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0.80 (0.35)
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1.10 ± 0.08
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Butyricimonas
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0.16 (0.19)
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0.35 (0.17)
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−0.19 ± 0.02
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Odoribacter
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0.23 (0.21)
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0.44 (0.20)
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−0.21 ± 0.03
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Parabacteroides
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0.25 (0.18)
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0.07 (0.07)
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0.18 ± 0.02
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Rikenella
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0.39 (0.24)
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0.18 (0.13)
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0.25 ± 0.03
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Euryarchaeota
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Methanobrevibacter
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0.13 (0.19)
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0.44 (0.17)
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−0.28 ± 0.02
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Firmicutes
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Anaerofustis
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0.12 (0.08)
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0.08 (0.04)
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0.03 ± 0.01
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Anaerostipes
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0.17 (0.08)
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0.12 (0.04)
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0.06 ± 0.01
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Blautia
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2.86 (0.67)
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3.22 (0.46)
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−0.36 ± 0.08
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Butyrivibrio
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0.10 (0.07)
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0.13 (0.06)
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−0.03 ± 0.01
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Clostridium
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1.09 (0.26)
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0.87 (0.13)
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0.21 ± 0.03
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Coprobacillus
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0.20 (0.27)
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0.14 (0.08)
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0.08 ± 0.03
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Coprococcus
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1.96 (0.42)
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2.26 (0.29)
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−0.28 ± 0.05
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Dehalobacterium
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0.05 (0.08)
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0.18 (0.03)
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−0.13 ± 0.01
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Dorea
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0.46 (0.12)
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0.51 (0.09)
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−0.05 ± 0.02
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Epulopiscium
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0.14 (0.11)
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0.00 (0.00)
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0.15 ± 0.01
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Oscillospira
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2.11 (0.53)
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2.85 (0.31)
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−0.79 ± 0.07
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p-75-a5
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0.13 (0.06)
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0.00 (0.00)
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0.13 ± 0.01
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Phascolarctobacterium
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0.27 (0.24)
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0.00 (0.00)
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0.26 ± 0.03
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rc4–4
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0.13 (0.06)
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0.23 (0.03)
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−0.10 ± 0.01
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Proteobacteria
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Campylobacter
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0.08 (0.08)
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0.00 (0.00)
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0.08 ± 0.01
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Desulfovibrio
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0.58 (0.22)
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0.00 (0.00)
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0.57 ± 0.03
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Oxalabacter
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0.10 (0.06)
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0.13 (0.03)
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−0.03 ± 0.01
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Tenericutes
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Anaeroplasma
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0.23 (0.18)
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0.10 (0.09)
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0.12 ± 0.02
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Verrucomicrobia
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Akkermansia
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1.62 (0.45)
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0.91 (0.23)
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0.68 ± 0.05
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